Elaine Angelino

Elaine Angelino

elaine(at)eecs(dot)harvard(dot)edu

I am a PhD candidate in computer science at Harvard University.
My adviser is Prof. Margo Seltzer.

I am also an Applied Math adviser for undergraduates.

Fun thing! sousvide

Selected Publications

Elaine Angelino, Michael Goodrich, Michael Mitzenmacher, and Justin Thaler. External-Memory Multimaps. ISAAC 2011: 22nd International Symposium on Algorithms and Computation. 2011 Dec. arXiv pdf source

Elaine Angelino, Uri Braun, David A. Holland, Peter Macko, Daniel Margo, and Margo Seltzer. Provenance Integration Requires Reconciliation. TaPP 2011: 3rd USENIX Workshop on the Theory and Practice of Provenance. 2011 Jun. html pdf

Elaine Angelino, Daniel Yamins, and Margo Seltzer. StarFlow: A script-centric data analysis environment. IPAW 2010: 3rd International Provenance and Annotation Workshop. 2010 Jun. html pdf source

Adam C. Palmer, Elaine Angelino, and Roy Kishony. Chemical decay of an antibiotic inverts selection for resistance. Nature Chemical Biology. 2010 Feb; 6: 105-7. html pdf

Elaine Angelino and Michael P. Brenner. Excitability constraints on voltage-gated sodium channels. PLoS Computational Biology. 2007 Sep; 3(9): 1751-60. html pdf

Maxime Descoteaux, Elaine Angelino, Shaun Fitzgibbons, and Rachid Deriche. Regularized, fast, and robust analytical Q-ball imaging. Magnetic Resonance in Medicine. 2007 Sep; 58(3): 497-510. html pdf

Maxime Descoteaux, Elaine Angelino, Shaun Fitzgibbons, and Rachid Deriche. Apparent diffusion coefficients from high angular resolution diffusion imaging: estimation and applications. Magnetic Resonance in Medicine. 2006 Aug; 56(2): 395-410. html pdf

Other Work

Daria Van Tyne, Daniel J. Park, Stephen F. Schaffner, Daniel E. Neafsey, Elaine Angelino, et al. Identification and Functional Validation of the Novel Antimalarial Resistance Locus PF10_0355 in Plasmodium falciparum. PLoS Genetics. 2011 Apr; 7(4). html pdf

Elaine Angelino, Uri Braun, David A. Holland, Peter Macko, Daniel Margo, and Margo Seltzer. Adventures in provenance integration. NEDB 2011: New England Database Summit. 2011 Jan. pdf url

Elaine Angelino. Compressing graphs with semantic structure. 2010 Dec. pdf

Elaine Angelino, Daniel Yamins, and Margo Seltzer. StarFlow: A cloud-enabled Python workflow engine for scientific analysis pipelines. SciPy 2010: Python for Scientific Computing Conference, Parallel Processing & Cloud Computing Track. 2010 Jun. url

Sharon R. Grossman, Ilya Shylakhter, et al. A composite of multiple signals distinguishes causal variants in regions of positive selection. Science. 2010 Feb; 327(5967): 883-886. html pdf

Rachel Daniels, Sarah K. Volkman, Danny A. Milner, et al. A general SNP-based molecular barcode for Plasmodium falciparum identification and tracking. Malaria Journal. 2008 Oct; 7(223). html pdf

Elaine Angelino. Constraints on the kinetics of sodium channels. Undergraduate thesis. 2006 Apr. pdf

Elaine Angelino, Shaun Fitzgibbons, and Alexander Glasser. 2006 MCM: Mathematical Contest in Modeling. Problem B. html pdf

Teaching

COMPSCI 61 - Systems Programming and Machine Organization, Fall 2011
APMTH 50 - Introduction to Applied Mathematics, Spring 2009

Code

Tabular, a Python package for working with tabular data. PyPI github

Fun

The Science and History of Cookies and Brownies. Cambridge, MA. 2012 Apr 25.
A food pyramid made of cookies. The Boston Globe. 2011 Dec 11. buildatetrahedron.pdf